Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015831237.1_cds_XP_016504438.1_17881
CDS Infomation

[gene=LOC107822414] [db_xref=GeneID:107822414] [protein=cationic amino acid transporter 1-like] [protein_id=XP_016504438.1] [location=complement(join(23148..24049,24209..25109))] [gbkey=CDS]
Sequence

ATGGTTAATAACATTAGTGAAAATGTTGATCAAAGGCATAATACACTGAAGAAGAGGGGC
TGTGGATGCAGCAAAGATGATTTTTTGCCAGAGGAATCGTTCACGAGCTGGGGAAGTTAT
GCACAAGCATTACGTGAAACAAAAACACGGCTTAAAGACCGCATATTGTCTCGATCTTCG
GACCAATTAGAGCTCCATGAAGTGCGTGATCGTAGCCAGCATCAGATGAAGAAATTGTTG
AATTGGTTTGATTTGATTTGGTTTGGTATTGGTGCAGTAATGGGTGCTGGAGTTTTTGTA
CTTACTGGTGAAGCTACTAAAAACATTGCTGGCCCTGCTGTTTTACTGTCCTATGTTATA
TCAGGCATCTCTGCTCTGCTTTCTGTGTTGTGCTATACTGAATTCTCAGTTGAACTCCCT
GTTGCTGGTGGTTCATTTGCATATCTGAGAGTGGAACTTGGCGATTTCATCGCTTTCATT
GCTGCAGGGAACATTCTGTTTGAGTACATTGTGAGTGGTGCTAGTGTTGCGCGATCTTGG
ACTTCCTATTTTGCGACTTTATGCAATCACAAGCCTGATGATTTCCGTATCAATGTCTCG
AGTCTTGCTGAGGGTTACAACCACTTAGATCCTATAGCAATTGTTGTCTCAATGGTCATT
TGTGTAGGTGCATCCTTGAGCATGAAAGGGTCCTCGCGTTTTAATTCATTTGTGACCATA
GTACATATAATTGTCATGGTTTTTATACTTGTTGCTGGCCTATCTAAGGCGAATGTGGCT
AATTATTCAAGCTTTGCACCTTATGGTGCTCGTGGCGTCCTGAAAGCAGCAGCTATGCTC
TTCTTTGCTTATGTTGGATTTGATGGTGTCGCAACTCTTGGGGAAGAGATTAAGAATCCA
GGTAGGGATATCCCTCTGGGTCTAATAGGTTCGATGGTGGTTATTATCACAATATATTGC
CTCCTAGCCGCGACGTTGTGCCTAATGCAACCTTTTAATCAAGTAGATGTTGATGCCCCA
TTTACCATTGCCTTCCAAGCAGTAGGGATGAATTGGGCAAAGTACATAGTTGCATTTGGG
GCTTTGAAGGGGATGACAACAGTTTTGCTGGCCAACATAATTAGTCAAGCTAGGTATTTT
ACACACATTGCAAGAACCCATATGGCCCCTCCATTTCTTGCTGCAATTAGTGAAAAGACC
GGGACACCTGTTACTGCTACAGTTATAATGACCGCGGCGAATTGCATTATGGCCTTCTTC
ACAAGTCTTGACATATTGGCAAACCTTGTTTCAATCGCCACATTGTTTGTGTTCTCACTA
GTTCCCCTAGCACTTCTAGTGAGACGTTACTACGTGTCAGGGGAAACATCAGATGCTGAT
AGGAAAAAACTCATTCTGTTCTTGGTTGTGATCACACTGTCCTCAATTGGATCAGGTGTT
TGTTGGGCAATCAGCGAAAATGCTTGGCTCGGGTGCATAATTACTGTTGGAGTTTGGTTT
TTCGCCACTTTGGGGCTAAATTTAATGCTAAAGGCGCGAAAGCCTAAGGTATGGGGATTA
CCATTGATGCCATGGATTCCATCTGCTAGTGTAGCTATTAATGTGTTCATCATGAGCTCC
ATTGATGGTGCATCATTTGTGAGATTTTCAGTTTGGACCGCTATTTTGCTTGTTTACTAC
TTGCTTGTAGGATTGCATGCTACCTATGATGCAGCCAAGGAGATTGGTAGTAATGCTTCT
CATATAACTGATGTTGAAGCCAATGCAGCAAGGACCAGTGAAACTGGAGTAGCTAATAAC
TAG

Peptide Sequence

PEP ID

XP_016504438.1
PEP Infomation

PREDICTED: cationic amino acid transporter 1-like [Nicotiana tabacum]
Sequence

MVNNISENVDQRHNTLKKRGCGCSKDDFLPEESFTSWGSYAQALRETKTRLKDRILSRSS
DQLELHEVRDRSQHQMKKLLNWFDLIWFGIGAVMGAGVFVLTGEATKNIAGPAVLLSYVI
SGISALLSVLCYTEFSVELPVAGGSFAYLRVELGDFIAFIAAGNILFEYIVSGASVARSW
TSYFATLCNHKPDDFRINVSSLAEGYNHLDPIAIVVSMVICVGASLSMKGSSRFNSFVTI
VHIIVMVFILVAGLSKANVANYSSFAPYGARGVLKAAAMLFFAYVGFDGVATLGEEIKNP
GRDIPLGLIGSMVVIITIYCLLAATLCLMQPFNQVDVDAPFTIAFQAVGMNWAKYIVAFG
ALKGMTTVLLANIISQARYFTHIARTHMAPPFLAAISEKTGTPVTATVIMTAANCIMAFF
TSLDILANLVSIATLFVFSLVPLALLVRRYYVSGETSDADRKKLILFLVVITLSSIGSGV
CWAISENAWLGCIITVGVWFFATLGLNLMLKARKPKVWGLPLMPWIPSASVAINVFIMSS
IDGASFVRFSVWTAILLVYYLLVGLHATYDAAKEIGSNASHITDVEANAARTSETGVANN

Transcript Sequence

Gene sequence data has not been registered.